tv.qiagenbioinformatics.com

Pathways and knowledge graphs have provided valuable insights into disease pathology, toxicology, target safety assessment, drug MOA and biological mechanisms in general. Though this is not possible without a high quality, reliable database. QIAGEN Knowledgebase is a comprehensive database with causal reasoning that is regularly updated from trusted peer-review publications and other sources using...

The Cancer Gene Census (CGC) is a widely used module within the Catalogue Of Somatic Mutations In Cancer (COSMIC) that comprises an ongoing effort to catalogue and describe all genes with causal impact in human cancer. In CGC, genes are characterized according to their roles in cancer – tumor suppressor, oncogene or fusion gene – and divided into two tiers based on the strength of supporting evide...

In this training, you will learn how to analyze and interpret your own single cell RNA-seq data using QIAGEN CLC Genomics Workbench starting with either FASTQ or matrix files. Using CLC Genomics Workbench, you will learn how to perform secondary analysis on your single cell RNA-seq data. Specifically, you will learn how to: Import your raw FASTQ or processed cell-matrix files. Use pre-configured b...

QIAGEN CLC Microbial Genomics Module provides tools and workflows for a broad range of bioinformatics applications, including microbiome analysis, isolate characterization, functional metagenomics and antimicrobial resistance characterization. The module supports the analysis of bacterial, viral and eukaryotic (fungal) genomes and metagenomes. This training will be focused on amplicon-based taxono...

QIAGEN OmicSoft Lands are high-quality curated repositories of genomics and proteomics data sourced from public, published studies (GEO, EBI, SRA) and consortia (TCGA, CPTAC, GTEx, and more). Because of our expert curation and stringent quality checks, OmicSoft users can deeply investigate across diverse oncology and normal tissue/cell datasets to discover and validate candidate drug targets and b...

Discover actionable drug targets in your spatial transcriptomics data with systems biology and network analysis. In this 60-minute session, we’ll start with differential expression data and explore ways to derive biological insights across experimental observations. Then, we’ll investigate and compare these findings across other harmonized and curated data. We’ll show you how to: Identify regions...

Are you new to QIAGEN Ingenuity Pathway Analysis (IPA) or interested in expanding your skill set? Join us as we learn more on large dataset analysis and knowledge base queries using QIAGEN IPA. You’ll learn to: • Upload multiple dataset types (e.g., RNA-seq, proteomics, metabolomics) and perform interactive core/pathway analysis in IPA • Learn how to interpret different results, including pathways...

See how highly sensitive somatic detection of classic tumor reference samples is made possible through the Twist Oncology - DNA CGP Panel™ combined with downstream analysis using QIAGEN® CLC Genomics Workbench. What is the Twist Oncology - DNA CGP Panel? It is a panel from Twist Biosciences® that is designed for the comprehensive genomic profiling (CGP) of solid tumors to find pathogenic variants....

In this video we introduce sample batching using CLC tools. This can be helpful when you need to perform the same analysis on a large number of files. Also see this manual page  for more details: https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=Batch_processing.html

This video demonstrates how to analyze multiple input files per sample using batch mode. Please also see this FAQ page for more details: How can I run a batch job with multiple libraries for each sample?    

The history view keeps track of what tools and parameters were used to generate results in CLC. This video shows how the history view can be used to compare two different analyses when the results are unexpected. Details about the history view can be found on this manual page: https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=History_Element_Info_view...

This video provides a quick introduction to myCLC. If you do not already have access to myCLC Please contact bioinformaticslicense@qiagen.com Also, check out these FAQ pages: What is myCLC?   How can I get access to myCLC?   How can I find information about my CLC licenses?     How can I add someone as a technical contact to myCLC?   How can I view information for another...

In this video you can learn how to import tracks and create a track list in CLC. Track lists enable users to view multiple track elements at once. Track lists also feature an interactive link between the table view and the plot view. Use track lists to browse genomic features, zoom into regions of interest, visualize read mappings, inspect variants, and more. Please also see this manual page for m...

This video shows how to customize volcano plots in CLC Genomics Workbench. Check out these tutorials for more RNA-seq related topics: https://digitalinsights.qiagen.com/support/tutorials/#:~:text=Expression%20and%20fusions

More and more biopharma and academic groups are looking to process a large number of samples simultaneously or for a quicker turnaround time. This webinar will introduce a flexible and powerful setup for running your NGS sequence analyses through servers or Amazon Web Services (AWS). See how QIAGEN CLC Genomics Workbench can be used to customize workflows and send analyses for batch execution. We...

The increasing adoption of next-generation sequencing in many fields has made RNA-seq data analysis and interpretation essential skills for researchers. In this webinar, discover how you can effortlessly process FASTQ files with QIAGEN CLC Genomics Workbench (CLC). Next, you will import differential expression results directly into QIAGEN Ingenuity Pathway Analysis (IPA) for downstream analysis –...

Now, you can access and share the interpretative power of QIAGEN Ingenuity Pathway Analysis (IPA) in an easy-to-consume format – without installing any extra software. IPA Interpret identifies and summarizes the biological themes in your results with the help of AI, creating a shareable, interactive report.   You will learn how to: • Create an IPA Interpret report that can be easily shared wi...

Join us for an in-depth webinar showcasing the discovery of functional insights in microbial communities using QIAGEN CLC Genomics Workbench tools. Ideal for microbiologists, bioinformaticians and researchers aiming to uncover functional signatures in microbial communities and drive data-driven discoveries, you will learn how to perform a comprehensive whole metagenome functional analysis, from ra...

From clinicians to translational researchers to drug developers, everyone is feeling the pressure to match patients with the right therapy faster. The challenge intensifies with rare and inherited diseases, where information is limited and affected individuals are few and scattered across the world.   But you can cut weeks from your variant interpretation workflow – without compromising accur...